fixed bug in summary.shared for groups

[mothur.git] / fullmatrix.cpp

diff --git a/fullmatrix.cpp b/fullmatrix.cpp
index 64d7b6af2dbe39279164fbe299c86a617af278e7..6ea2318d740003f8cf46ec7e63815c175e1893ca 100644 (file)
--- a/fullmatrix.cpp
+++ b/fullmatrix.cpp
@@ -56,14 +56,9 @@ FullMatrix::FullMatrix(ifstream& filehandle) {
                if (square == true) { readSquareMatrix(filehandle); }
                else { readLTMatrix(filehandle); }
                
-               
-               
-       printMatrix(cout);
                //sort sequences so they are gathered in groups for processing
                sortGroups(0, numSeqs-1);
-               cout << "after sort" << endl;
-       printMatrix(cout);
-               
+                       
        }
        catch(exception& e) {
                cout << "Standard Error: " << e.what() << " has occurred in the FullMatrix class Function FullMatrix. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
@@ -204,8 +199,6 @@ void FullMatrix::sortGroups(int low, int high){
                                
                                i++; 
                                j--;
-cout << "swapping rows " << i << " " << j << endl;
-printMatrix(cout); cout << endl;
                        }
                } while(i <= j);