working on pam

[mothur.git] / filtersharedcommand.cpp

diff --git a/filtersharedcommand.cpp b/filtersharedcommand.cpp
index 5b5fcb1a5ed36578ebb70b3e8f3ac1048ec1ad4f..a2510a697737c5596a47cf5a0f36a950959c2b04 100644 (file)
--- a/filtersharedcommand.cpp
+++ b/filtersharedcommand.cpp
@@ -325,7 +325,7 @@ int FilterSharedCommand::processShared(vector<SharedRAbundVector*>& thislookup)
        try {
                
                //save mothurOut's binLabels to restore for next label
-               vector<string> saveBinLabels = m->currentBinLabels;
+               vector<string> saveBinLabels = m->currentSharedBinLabels;
                
         map<string, string> variables; 
         variables["[filename]"] = outputDir + m->getRootName(m->getSimpleName(sharedfile));
@@ -474,7 +474,7 @@ int FilterSharedCommand::processShared(vector<SharedRAbundVector*>& thislookup)
                m->openOutputFile(outputFileName, out);
                outputTypes["shared"].push_back(outputFileName);  outputNames.push_back(outputFileName);
                
-        m->currentBinLabels = filteredLabels;
+        m->currentSharedBinLabels = filteredLabels;
         
                filteredLookup[0]->printHeaders(out);
                
@@ -486,7 +486,7 @@ int FilterSharedCommand::processShared(vector<SharedRAbundVector*>& thislookup)
         
         
         //save mothurOut's binLabels to restore for next label
-               m->currentBinLabels = saveBinLabels;
+               m->currentSharedBinLabels = saveBinLabels;
         
         for (int j = 0; j < filteredLookup.size(); j++) { delete filteredLookup[j]; }