addition of summary.seq command [pds]

[mothur.git] / filterseqscommand.cpp

diff --git a/filterseqscommand.cpp b/filterseqscommand.cpp
index 6c022426645cc7af9ae353106f4d167e64812bee..a6bd54982e9ca509463f5d40822d1ae232e83bb1 100644 (file)
--- a/filterseqscommand.cpp
+++ b/filterseqscommand.cpp
@@ -23,7 +23,7 @@ FilterSeqsCommand::FilterSeqsCommand(){
        db = readSeqs->getDB();
        numSeqs = db->size();
        
-       alignmentLength = db->get(0).getLength();
+       alignmentLength = db->get(0).getAlignLength();
 
        filter = string(alignmentLength, '1');
 }