added mothur executable to cvs

[mothur.git] / filterseqscommand.cpp

diff --git a/filterseqscommand.cpp b/filterseqscommand.cpp
index e676f1fbd7af7b581b7552bd25c844255ba4e8ce..798ae64bfa88620fb6403f68842c50cee381ca25 100644 (file)
--- a/filterseqscommand.cpp
+++ b/filterseqscommand.cpp
@@ -867,7 +867,7 @@ int FilterSeqsCommand::MPICreateFilter(int start, int num, Filters& F, MPI_File&
 int FilterSeqsCommand::createProcessesCreateFilter(Filters& F, string filename) {
        try {
 #if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
-               int process = 0;
+               int process = 1;
                int num = 0;
                processIDS.clear();
                
@@ -908,13 +908,16 @@ int FilterSeqsCommand::createProcessesCreateFilter(Filters& F, string filename)
                        }else { m->mothurOut("unable to spawn the necessary processes."); m->mothurOutEndLine(); exit(0); }
                }
                
+               //parent do your part
+               num = driverCreateFilter(F, filename, lines[0]);
+               
                //force parent to wait until all the processes are done
-               for (int i=0;i<processors;i++) { 
+               for (int i=0;i<(processors-1);i++) { 
                        int temp = processIDS[i];
                        wait(&temp);
                }
                
-               //parent reads in and combine Filter info
+               //parent reads in and combines Filter info
                for (int i = 0; i < processIDS.size(); i++) {
                        string tempFilename = filename + toString(processIDS[i]) + "filterValues.temp";
                        ifstream in;