added mpi code to cluster.split command

[mothur.git] / filterseqscommand.cpp

diff --git a/filterseqscommand.cpp b/filterseqscommand.cpp
index 2bf0fa344eaeb924525bd6f906d664c8874f3d61..33790fe97632525cbb6c155ab953da531f770078 100644 (file)
--- a/filterseqscommand.cpp
+++ b/filterseqscommand.cpp
@@ -116,7 +116,7 @@ FilterSeqsCommand::FilterSeqsCommand(string option)  {
                        
                        vertical = validParameter.validFile(parameters, "vertical", false);             
                        if (vertical == "not found") { 
-                               if ((hard == "") && (trump == '*')) { vertical = "T"; } //you have not given a hard file or set the trump char.
+                               if ((hard == "") && (trump == '*') && (soft == 0)) { vertical = "T"; } //you have not given a hard file or set the trump char.
                                else { vertical = "F";  }
                        }