working on testing

[mothur.git] / filterseqscommand.cpp

diff --git a/filterseqscommand.cpp b/filterseqscommand.cpp
index 4ee674856223d3ef6ec2e9605437ae915f6e3ac7..1b3b3cfd415cd51605fe3c09a8b3b5a9f11b160d 100644 (file)
--- a/filterseqscommand.cpp
+++ b/filterseqscommand.cpp
@@ -362,7 +362,7 @@ int FilterSeqsCommand::filterSequences() {
                                
                                if (m->control_pressed) {  return 1; }
                #else
-                               numFastaSeqs = driverRunFilter(filter, filteredFasta, fastafileNames[s], lines[0]);
+                               int numFastaSeqs = driverRunFilter(filter, filteredFasta, fastafileNames[s], lines[0]);
                                numSeqs += numFastaSeqs;
 
                                if (m->control_pressed) {  return 1; }
@@ -662,7 +662,7 @@ string FilterSeqsCommand::createFilter() {
                                
                                if (m->control_pressed) {  return filterString; }
                #else
-                               numFastaSeqs = driverCreateFilter(F, fastafileNames[s], lines[0]);
+                               int numFastaSeqs = driverCreateFilter(F, fastafileNames[s], lines[0]);
                                numSeqs += numFastaSeqs;
                                if (m->control_pressed) {  return filterString; }
                #endif