working on current change

[mothur.git] / filterseqscommand.cpp

diff --git a/filterseqscommand.cpp b/filterseqscommand.cpp
index 167dd3ce835f071e70c187ba9507fb2931a2e548..1204663a52c73a3a98af34c42c4a93ec044e7200 100644 (file)
--- a/filterseqscommand.cpp
+++ b/filterseqscommand.cpp
@@ -190,6 +190,7 @@ FilterSeqsCommand::FilterSeqsCommand(string option)  {
                                                }else{  
                                                        string simpleName = m->getSimpleName(fastafileNames[i]);
                                                        filterFileName += simpleName.substr(0, simpleName.find_first_of('.'));
+                                                       m->setFastaFile(fastafileNames[i]);
                                                }
                                                in.close();
                                        }