broke up globaldata and moved error checking and help into commands

[mothur.git] / fileoutput.h

diff --git a/fileoutput.h b/fileoutput.h
index 359946c87eac9c394385d72bb27eb3fc3b6d9ff5..209dd1b1772cc1f58e18cce4826ffcddd541d278 100644 (file)
--- a/fileoutput.h
+++ b/fileoutput.h
@@ -127,7 +127,7 @@ private:
 class ColumnFile : public FileOutput {
        
 public:
-       ColumnFile(string n) : FileOutput(), inName(n), counter(0), outName(getPathName(n) + ".temp") { globaldata = GlobalData::getInstance(); };
+       ColumnFile(string n, string i) : FileOutput(), iters(i), inName(n), counter(0), outName(getPathName(n) + ".temp") { globaldata = GlobalData::getInstance(); };
        ~ColumnFile();
        
        //to make compatible with parent class
@@ -144,6 +144,7 @@ private:
        ifstream inFile;
        ofstream outFile;
        int counter;
+       string iters;
 };
 
 /***********************************************************************/