bugs fixes while testing for 1.5 release

[mothur.git] / fileoutput.cpp

diff --git a/fileoutput.cpp b/fileoutput.cpp
index 597a05a6ad9a892caff5f0b6f69269ae6af4013d..004ed8313511c2dd42d4b87aca93c0ad5750bce5 100644 (file)
--- a/fileoutput.cpp
+++ b/fileoutput.cpp
@@ -82,8 +82,10 @@ void ThreeColumnFile::resetFile(){
                renameOk = rename(outName.c_str(), inName.c_str());
                
                //checks to make sure user was able to rename and remove successfully
-               if ((renameOk != 0)) {  mothurOut("Unable to rename necessary files."); mothurOutEndLine(); }
-
+               if ((renameOk != 0)) { 
+                       mothurOut("Unable to rename " + outName); mothurOutEndLine();
+                       perror(" : ");
+               }       
        }
        catch(exception& e) {
                errorOut(e, "ThreeColumnFile", "resetFile");
@@ -182,8 +184,10 @@ void ColumnFile::resetFile(){
                renameOk = rename(outName.c_str(), inName.c_str());
                
                //checks to make sure user was able to rename and remove successfully
-               if ((renameOk != 0)) { mothurOut("Unable to rename necessary files."); mothurOutEndLine(); }
-
+               if ((renameOk != 0)) { 
+                       mothurOut("Unable to rename " + outName); mothurOutEndLine();
+                       perror(" : ");
+               }       
        }
        catch(exception& e) {
                errorOut(e, "ColumnFile", "resetFile");
@@ -265,8 +269,10 @@ void SharedThreeColumnFile::resetFile(){
                renameOk = rename(outName.c_str(), inName.c_str());
                
                //checks to make sure user was able to rename and remove successfully
-               if ((renameOk != 0)) { mothurOut("Unable to rename necessary files."); mothurOutEndLine(); }
-
+               if ((renameOk != 0)) { 
+                       mothurOut("Unable to rename " + outName); mothurOutEndLine();
+                       perror(" : ");
+               }       
        }
        catch(exception& e) {
                errorOut(e, "SharedThreeColumnFile", "resetFile");
@@ -348,8 +354,10 @@ void OneColumnFile::resetFile(){
                renameOk = rename(outName.c_str(), inName.c_str());
                
                //checks to make sure user was able to rename and remove successfully
-               if ((renameOk != 0)) { mothurOut("Unable to rename necessary files."); mothurOutEndLine(); }
-
+               if ((renameOk != 0)) { 
+                       mothurOut("Unable to rename " + outName); mothurOutEndLine();
+                       perror(" : ");
+               }       
        }
        catch(exception& e) {
                errorOut(e, "OneColumnFile", "resetFile");
@@ -435,14 +443,16 @@ void SharedOneColumnFile::resetFile(){
                        outFile.close();
                }       
                counter = 1;
-               
+
                remove(inName.c_str());
+
                renameOk = rename(outName.c_str(), inName.c_str());
                
                //checks to make sure user was able to rename and remove successfully
-               if ((renameOk != 0)) { mothurOut("Unable to rename necessary files."); mothurOutEndLine(); }
-
-               
+               if ((renameOk != 0)) { 
+                       mothurOut("Unable to rename " + outName); mothurOutEndLine();
+                       perror(" : ");
+               }       
        }
        catch(exception& e) {
                errorOut(e, "SharedOneColumnFile", "resetFile");