]> git.donarmstrong.com Git - mothur.git/blobdiff - errorchecking.h
got rid of extra temp files in dist.seqs
[mothur.git] / errorchecking.h
index 3ddc65c962cbe35ec8e0d7acb0389e113efdc12f..7f9e4580bd8b37110c241d438543916ef9f3b9c2 100644 (file)
@@ -34,7 +34,8 @@ class ErrorCheck {
                void clear();
                void refresh();
                string phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, orderfile, fastafile, treefile, sharedfile, cutoff, format; 
-               string precision, method, fileroot, label, line, iters, jumble, freq, single, rarefaction, shared, summary, randomtree, abund, sorted, scaler;
+               string precision, method, fileroot, label, line, iters, jumble, freq, single, rarefaction, shared, summary, randomtree, abund, sorted, trump, soft, filter, scale, countends, processors, size;
+               string candidatefile, search, ksize, align, match, mismatch, gapopen, gapextend;
                string commandName, optionText;
                bool errorFree;