void validateReadDist();
void validateReadPhil();
void validateParseFiles();
+ void validateTreeFiles();
void clear();
- string phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, orderfile, fastafile, cutoff, format;
+ string phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, orderfile, fastafile, treefile, cutoff, format;
string precision, method, fileroot, label, line, iters, jumble, freq, single, rarefaction, shared, summary;
string commandName, optionText;
bool errorFree;