if (parameter == "abund" ) { abund = value; }
if (parameter == "random" ) { randomtree = value; }
if (parameter == "sorted" ) { sorted = value; }
+ if (parameter == "scaler" ) { scaler = value; }
+
}
//gets the last parameter and value
if (parameter == "random" ) { randomtree = value; }
if (parameter == "abund" ) { abund = value; }
if (parameter == "sorted" ) { sorted = value; }
+ if (parameter == "scaler" ) { scaler = value; }
}
}
if ((globaldata->getListFile() == "") && (globaldata->getRabundFile() == "") && (globaldata->getSabundFile() == "")) { cout << "You must read a list, sabund or rabund before you can use the collect.single, rarefaction.single or summary.single commands." << endl; return false; }
}
- if ((commandName == "collect.shared") || (commandName == "rarefaction.shared") || (commandName == "summary.shared") ){
+ if ((commandName == "collect.shared") || (commandName == "rarefaction.shared") || (commandName == "summary.shared") || (commandName == "tree.groups") ){
if (globaldata->getSharedFile() == "") {
- if (globaldata->getListFile() == "") { cout << "You must read a list and a group, or a shared before you can use the collect.shared, rarefaction.shared or summary.shared commands." << endl; return false; }
- else if (globaldata->getGroupFile() == "") { cout << "You must read a list and a group, or a shared before you can use the collect.shared, rarefaction.shared or summary.shared commands." << endl; return false; }
+ if (globaldata->getListFile() == "") { cout << "You must read a list and a group, or a shared before you can use the collect.shared, rarefaction.shared, summary.shared or tree.groups commands." << endl; return false; }
+ else if (globaldata->getGroupFile() == "") { cout << "You must read a list and a group, or a shared before you can use the collect.shared, rarefaction.shared, summary.shared or tree.groups commands." << endl; return false; }
}
}