changed groupfile in classify.seqs to reflect multiple fasta files

[mothur.git] / engine.cpp

diff --git a/engine.cpp b/engine.cpp
index b68bf61e4703fbd77133f8ba72c8488a78519d29..9e5801b1b057b2f2a1cc4a986e105ae3e73f14b5 100644 (file)
--- a/engine.cpp
+++ b/engine.cpp
@@ -99,15 +99,6 @@ bool InteractEngine::getInput(){
 /***********************************************************************/
 string Engine::getCommand()  {
        try {
-       #ifdef USE_MPI //mpirun doesn't work with readline
-                               string nextCommand = "";
-                               
-                               mout->mothurOut("mothur > ");
-                               getline(cin, nextCommand);
-                               mout->mothurOutJustToLog(toString(nextCommand));
-                               
-                               return nextCommand;
-       #else
                #if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
                        #ifdef USE_READLINE
                                char* nextCommand = NULL;
@@ -138,7 +129,7 @@ string Engine::getCommand()  {
                                
                                return nextCommand;
                #endif
-       #endif
+       
                                                
        }
        catch(exception& e) {