fixed bug in phylo.diversity rooting. added filename patterns and create filename...

[mothur.git] / distancecommand.h

diff --git a/distancecommand.h b/distancecommand.h
index 9dea351250b7c7550a1071ca3189051345245d01..ddce0449d5498d48914f95d9ff64900b12837ccf 100644 (file)
--- a/distancecommand.h
+++ b/distancecommand.h
@@ -178,8 +178,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "dist.seqs";                   }
        string getCommandCategory()             { return "Sequence Processing"; }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "Schloss PD (2010). The effects of alignment quality, distance calculation method, sequence filtering, and region on the analysis of 16S rRNA gene-based studies. PLoS Comput Biol 6: e1000844. \nhttp://www.mothur.org/wiki/Dist.seqs"; }
        string getDescription()         { return "calculate the pairwaise distances between aligned sequences"; }