]> git.donarmstrong.com Git - mothur.git/blobdiff - distancecommand.h
got rid of extra temp files in dist.seqs
[mothur.git] / distancecommand.h
index 8322eeedee6721ae333fdcbd6bc0447c9d654c53..2cb653f790aeb970f2a8f9ba7e1122d2f8ef4c57 100644 (file)
@@ -34,9 +34,8 @@ private:
        ValidCalculators* validCalculator;
        Dist* distCalculator;
        SequenceDB* seqDB;
-       ofstream out, phylipOut;
+       ofstream out, outFile;
        ifstream in;
-       string outputFileName;
        string countends, phylip;
        int processors;
        float cutoff;
@@ -45,8 +44,8 @@ private:
        vector<linePair*> lines;
        
        void appendFiles(string, string);
-       void createProcesses(string, string);
-       int driver(Dist*, SequenceDB*, int, int, string, string, float);
+       void createProcesses(string);
+       int driver(Dist*, SequenceDB*, int, int, string, float);
 
 };