changes while testing

[mothur.git] / degapseqscommand.h

diff --git a/degapseqscommand.h b/degapseqscommand.h
index db93b02a299aae60666b1993469f7e00cdc31a58..3b03c9b0ca1d8a61704dd3c13885d12d8204100a 100644 (file)
--- a/degapseqscommand.h
+++ b/degapseqscommand.h
@@ -22,8 +22,12 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "degap.seqs";          }
        string getCommandCategory()             { return "Sequence Processing";         }
-       string getHelpString(); 
        
+       string getHelpString(); 
+    string getOutputPattern(string);   
+       string getCitation() { return "http://www.mothur.org/wiki/Degap.seqs"; }
+       string getDescription()         { return "removes gap characters from sequences"; }
+
        int execute(); 
        void help() { m->mothurOut(getHelpString()); }