moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / degapseqscommand.h

diff --git a/degapseqscommand.h b/degapseqscommand.h
deleted file mode 100644 (file)
index 342cd36..0000000
--- a/degapseqscommand.h
+++ /dev/null
@@ -1,42 +0,0 @@
-#ifndef DEGAPSEQSCOMMAND_H
-#define DEGAPSEQSCOMMAND_H
-
-/*
- *  degapseqscommand.h
- *  Mothur
- *
- *  Created by westcott on 6/21/10.
- *  Copyright 2010 Schloss Lab. All rights reserved.
- *
- */
-
-
-#include "command.hpp"
-
-class DegapSeqsCommand : public Command {
-public:
-       DegapSeqsCommand(string);
-       DegapSeqsCommand();
-       ~DegapSeqsCommand(){}
-       
-       vector<string> setParameters();
-       string getCommandName()                 { return "degap.seqs";          }
-       string getCommandCategory()             { return "Sequence Processing";         }
-       string getHelpString(); 
-       string getCitation() { return "http://www.mothur.org/wiki/Degap.seqs"; }
-       string getDescription()         { return "removes gap characters from sequences"; }
-
-       int execute(); 
-       void help() { m->mothurOut(getHelpString()); }  
-       
-private:
-
-       bool abort;
-       string fastafile, outputDir;
-       vector<string> outputNames;
-       vector<string> fastaFileNames;
-       
-};
-
-#endif
-