added modify names parameter to set.dir

[mothur.git] / deconvolutecommand.cpp

diff --git a/deconvolutecommand.cpp b/deconvolutecommand.cpp
index 09e077b57ca8800d3663f6dd5c3515102aaa1129..8b73425fc5c2aefb2d7e3b4a87caf4fa8be44c40 100644 (file)
--- a/deconvolutecommand.cpp
+++ b/deconvolutecommand.cpp
@@ -209,7 +209,7 @@ int DeconvoluteCommand::execute() {
         }
         CountTable ct;
         if (countfile != "")  {  
-            ct.readTable(countfile);
+            ct.readTable(countfile, false);
             if (countfile == outCountFile){
                 //prepare filenames and open files
                 map<string, string> mvariables;