working on chimeras

[mothur.git] / decalc.h

diff --git a/decalc.h b/decalc.h
index 5f0a82025c557a75c3adc4715526fa17bd5fe5a5..011993652618dc38294ade4638ad0657238b9377 100644 (file)
--- a/decalc.h
+++ b/decalc.h
@@ -45,7 +45,7 @@ class DeCalculator {
                void setAlignmentLength(int l) {  alignLength = l;  }
                void runMask(Sequence*);
                void trimSeqs(Sequence*, Sequence*, map<int, int>&);
-               void trimSeqs(Sequence*, vector<Sequence*>);
+               map<int, int> trimSeqs(Sequence*, vector<Sequence*>);
                void removeObviousOutliers(vector< vector<quanMember> >&, int);
                vector<float> calcFreq(vector<Sequence*>, string);
                vector<int> findWindows(Sequence*, int, int, int&, int);