moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / datavector.hpp

diff --git a/datavector.hpp b/datavector.hpp
deleted file mode 100644 (file)
index e6c839d..0000000
--- a/datavector.hpp
+++ /dev/null
@@ -1,59 +0,0 @@
-#ifndef datavector_h
-#define datavector_h
-
-
-#include "mothur.h"
-#include "mothurout.h"
-
-/* This class is parent to listvector, ordervector, rabundvector, sabundvector, sharedordervector, sharedrabundvector, sharedsabundvector. 
-       The child classes all contain OTU information in different forms. */
-       
-
-class RAbundVector;
-class SAbundVector;
-class OrderVector;
-class SharedListVector;
-class SharedOrderVector;
-class SharedSAbundVector;
-class SharedRAbundVector;
-class SharedRAbundFloatVector;
-class GroupMap;
-
-class DataVector {
-       
-public:
-       DataVector(){ m = MothurOut::getInstance(); }// : maxRank(0), numBins(0), numSeqs(0){};
-       DataVector(string l) : label(l) {};
-       DataVector(const DataVector& dv) : label(dv.label){};//, maxRank(dv.maxRank), numBins(dv.numBins), numSeqs(dv.numSeqs) {};
-       DataVector(ifstream&);
-       DataVector(ifstream&, GroupMap*);
-       virtual ~DataVector(){};
-       
-//     virtual int getNumBins()        {       return numBins;         }
-//     virtual int getNumSeqs()        {       return numSeqs;         }
-//     virtual int getMaxRank()        {       return maxRank;         }
-       
-       virtual void resize(int) = 0;
-       virtual int size()      = 0;
-       virtual void print(ostream&) = 0;
-       virtual void printHeaders(ostream&) {};
-       virtual void clear() = 0;
-       
-       void setLabel(string l)         {       label = l;                      }
-       string getLabel()                       {       return label;           }
-
-       virtual RAbundVector getRAbundVector() = 0;
-       virtual SAbundVector getSAbundVector() = 0;
-       virtual OrderVector getOrderVector(map<string,int>* hold = NULL) = 0;
-       
-protected:
-       string label;
-       MothurOut* m;
-//     int maxRank;
-//     int numBins;
-//     int numSeqs;    
-};
-
-/***********************************************************************/
-
-#endif