added versioning info to all shortcut files mothur makes.

[mothur.git] / database.hpp

diff --git a/database.hpp b/database.hpp
index efc7ba7f111d956c31d20626d825c079cf7963c8..9293f13d5f091251d77115d2f3dc5344868d2c5c 100644 (file)
--- a/database.hpp
+++ b/database.hpp
@@ -47,6 +47,7 @@ public:
        virtual ~Database();
        virtual void generateDB() = 0; 
        virtual void addSequence(Sequence) = 0;  //add sequence to search engine
+       virtual string getName(int) { return ""; }  
        virtual vector<int> findClosestSequences(Sequence*, int) = 0;  // returns indexes of n closest sequences to query
        virtual vector<int> findClosestMegaBlast(Sequence*, int){return results;}
        virtual float getSearchScore();
@@ -56,11 +57,6 @@ public:
        virtual vector<int> getSequencesWithKmer(int){ vector<int> filler; return filler; };  
        virtual int getMaxKmer(){       return 1;       };
        
-       #ifdef USE_MPI  
-       virtual int MPISend(int) = 0;
-       virtual int MPIRecv(int) = 0;
-       #endif
-       
 protected:
        MothurOut* m;
        int numSeqs, longest;