moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / currentfile.h

diff --git a/currentfile.h b/currentfile.h
deleted file mode 100644 (file)
index 8f2ea48..0000000
--- a/currentfile.h
+++ /dev/null
@@ -1,96 +0,0 @@
-#ifndef CURRENTFILE_H
-#define CURRENTFILE_H
-
-/*
- *  currentfile.h
- *  Mothur
- *
- *  Created by westcott on 3/15/11.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-#include "mothurout.h"
-#include "mothur.h"
-
-/***********************************************/
-
-class CurrentFile {
-       
-       public:
-               static CurrentFile* getInstance() {
-                       if(instance == 0) {     instance = new CurrentFile();   }
-                       return instance;
-               }
-               
-               string getPhylipFile()          { return phylipfile;            }
-               string getColumnFile()          { return columnfile;            }
-               string getListFile()            { return listfile;                      }
-               string getRabundFile()          { return rabundfile;            }
-               string getSabundFile()          { return sabundfile;            }
-               string getNameFile()            { return namefile;                      }       
-               string getGroupFile()           { return groupfile;                     }       
-               string getOrderFile()           { return orderfile;                     }
-               string getOrderGroupFile()      { return ordergroupfile;        }
-               string getTreeFile()            { return treefile;                      }
-               string getSharedFile()          { return sharedfile;            }
-               string getRelAbundFile()        { return relabundfile;          }
-               string getDesignFile()          { return designfile;            }
-               string getFastaFile()           { return fastafile;                     }
-               string getSFFFile()                     { return sfffile;                       }
-               string getQualFile()            { return qualfile;                      }
-               string getOligosFile()          { return oligosfile;            }
-               
-               
-               void setListFile(string f)                      { listfile = m->getFullPathName(f);                             }
-               void setTreeFile(string f)                      { treefile = m->getFullPathName(f);                             }
-               void setGroupFile(string f)                     { groupfile = m->getFullPathName(f);                    }               
-               void setPhylipFile(string f)            { phylipfile = m->getFullPathName(f);                   }
-               void setColumnFile(string f)            { columnfile = m->getFullPathName(f);                   }
-               void setNameFile(string f)                      { namefile = m->getFullPathName(f);                             }       
-               void setRabundFile(string f)            { rabundfile = m->getFullPathName(f);                   }
-               void setSabundFile(string f)            { sabundfile = m->getFullPathName(f);                   }
-               void setSharedFile(string f)            { sharedfile = m->getFullPathName(f);                   }
-               void setRelAbundFile(string f)          { relabundfile = m->getFullPathName(f);                 }
-               void setOrderFile(string f)                     { orderfile = m->getFullPathName(f);                    }
-               void setOrderGroupFile(string f)        { ordergroupfile = m->getFullPathName(f);               }
-               void setDesignFile(string f)            { designfile = m->getFullPathName(f);                   }
-               void setFastaFile(string f)                     { fastafile = m->getFullPathName(f);                    }
-               void setSFFFile(string f)                       { sfffile = m->getFullPathName(f);                              }
-               void setQualFile(string f)                      { qualfile = m->getFullPathName(f);                             }
-               void setOligosFile(string f)            { oligosfile = m->getFullPathName(f);                   }
-       
-       private:
-               MothurOut* m;
-               string phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, designfile;
-               string orderfile, treefile, sharedfile, ordergroupfile, relabundfile, fastafile, qualfile, sfffile, oligosfile;
-               
-               static CurrentFile* instance;
-               CurrentFile( const CurrentFile& ); // Disable copy constructor
-               void operator=( const CurrentFile& ); // Disable assignment operator
-       
-               CurrentFile() { 
-                       phylipfile = "";
-                       columnfile = "";
-                       listfile = "";
-                       rabundfile = "";
-                       sabundfile = "";
-                       namefile = "";
-                       groupfile = "";
-                       designfile = "";
-                       orderfile = "";
-                       treefile = "";
-                       sharedfile = "";
-                       ordergroupfile = "";
-                       relabundfile = "";
-                       fastafile = "";
-                       qualfile = "";
-                       sfffile = "";
-                       oligosfile = "";
-               }
-               ~CurrentFile() { instance = 0; }
-};
-/***********************************************/
-
-#endif
-