in >> name; m->gobble(in); in >> thisTotal; m->gobble(in);
if (m->debug) { m->mothurOut("[DEBUG]: " + name + '\t' + toString(thisTotal) + "\n"); }
+ if (thisTotal == 0) { error=true; m->mothurOut("[ERROR]: Your count table contains a sequence named " + name + " with a total=0. Please correct."); m->mothurOutEndLine();
+ }
+
//if group info, then read it
vector<int> groupCounts; groupCounts.resize(numGroups, 0);
if (columnHeaders.size() > 2) { //file contains groups