moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / countgroupscommand.h

diff --git a/countgroupscommand.h b/countgroupscommand.h
deleted file mode 100644 (file)
index 2532a80..0000000
--- a/countgroupscommand.h
+++ /dev/null
@@ -1,42 +0,0 @@
-#ifndef COUNTGROUPSCOMMAND_H
-#define COUNTGROUPSCOMMAND_H
-
-/*
- *  countgroupscommand.h
- *  Mothur
- *
- *  Created by westcott on 8/9/11.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-#include "command.hpp"
-
-class CountGroupsCommand : public Command {
-       
-public:
-       
-       CountGroupsCommand(string);
-       CountGroupsCommand();   
-       ~CountGroupsCommand(){}
-       
-       vector<string> setParameters();
-       string getCommandName()                 { return "count.groups";                        }
-       string getCommandCategory()             { return "Sequence Processing";         }
-       string getHelpString(); 
-       string getCitation() { return "http://www.mothur.org/wiki/Count.groups"; }
-       string getDescription()         { return "counts the number of sequences in each group"; }
-       
-       int execute(); 
-       void help() { m->mothurOut(getHelpString()); }  
-       
-       
-private:
-       string sharedfile, groupfile, outputDir, groups, accnosfile;
-       bool abort;
-       vector<string> Groups;
-       
-       void readAccnos();
-};
-
-#endif