added primer.design command. fixed bug with linux unifrac subsampling, metastats...

[mothur.git] / consensusseqscommand.cpp

diff --git a/consensusseqscommand.cpp b/consensusseqscommand.cpp
index f0fc6bff9da6d6d8b0ed8b368ad2422f25cd732a..9bfdc9caba1e6bef2fe14d6eb469af2218bd29d8 100644 (file)
--- a/consensusseqscommand.cpp
+++ b/consensusseqscommand.cpp
@@ -219,6 +219,8 @@ int ConsensusSeqsCommand::execute(){
                
                if (abort == true) { if (calledHelp) { return 0; }  return 2;   }
                
+        int start = time(NULL);
+        
                readFasta();
                
                if (m->control_pressed) { return 0; }
@@ -391,6 +393,8 @@ int ConsensusSeqsCommand::execute(){
                        delete input;
                }
                
+        m->mothurOut("It took " + toString(time(NULL) - start) + " secs to find the consensus sequences.");
+        
                m->mothurOutEndLine();
                m->mothurOut("Output File Names: "); m->mothurOutEndLine();
                for (int i = 0; i < outputNames.size(); i++) {  m->mothurOut(outputNames[i]); m->mothurOutEndLine();    }