moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / completelinkage.cpp

diff --git a/completelinkage.cpp b/completelinkage.cpp
deleted file mode 100644 (file)
index 86e9054..0000000
--- a/completelinkage.cpp
+++ /dev/null
@@ -1,34 +0,0 @@
-
-#include "cluster.hpp"
-
-/***********************************************************************/
-
-CompleteLinkage::CompleteLinkage(RAbundVector* rav, ListVector* lv, SparseMatrix* dm, float c, string s) :
-       Cluster(rav, lv, dm, c, s)
-{}
-
-/***********************************************************************/
-//This function returns the tag of the method.
-string CompleteLinkage::getTag() {
-       return("fn");
-}
-
-
-/***********************************************************************/
-//This function updates the distance based on the furthest neighbor method.
-bool CompleteLinkage::updateDistance(MatData& colCell, MatData& rowCell) {
-       try {
-               bool changed = false;
-               if (colCell->dist < rowCell->dist) {
-                       colCell->dist = rowCell->dist;
-                       changed = true;
-               }       
-               return(changed);
-       }
-       catch(exception& e) {
-               m->errorOut(e, "CompleteLinkage", "updateDistance");
-               exit(1);
-       }
-}
-
-/***********************************************************************/