broke up globaldata and moved error checking and help into commands

[mothur.git] / commandoptionparser.hpp

diff --git a/commandoptionparser.hpp b/commandoptionparser.hpp
index f83f60e0064519f3e2c79ed63bb5e78fddf7065a..44df8f7619a0e8cb4ab39717934c04524337c346 100644 (file)
--- a/commandoptionparser.hpp
+++ b/commandoptionparser.hpp
@@ -9,9 +9,10 @@ class CommandOptionParser {
 public:
        CommandOptionParser(string);
        string getCommandString();
+       string getOptionString();
        
 private:
-       string commandString;
+       string commandString, optionString;
 };
 
 //**********************************************************************************************************************