added mergesfffiles command. added current directories to get.current commands output...

[mothur.git] / commandfactory.hpp

diff --git a/commandfactory.hpp b/commandfactory.hpp
index eb85c68513bc43ece5cf9802917ebe336bc03d5a..b1db1921a3a074ae059f8341570aa28477ef0cc0 100644 (file)
--- a/commandfactory.hpp
+++ b/commandfactory.hpp
@@ -33,6 +33,7 @@ public:
        string getLogfileName()                                 {       return logFileName;     }\r
        bool getAppend()                                                {       return append;                  }\r
        string getOutputDir()                                   {       return outputDir;               }\r
+    string getInputDir()                                       {       return inputDir;                }\r
        bool MPIEnabled(string);\r
        map<string, string> getListCommands()   {       return commands;                }\r
        \r