moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / commandfactory.hpp

diff --git a/commandfactory.hpp b/commandfactory.hpp
deleted file mode 100644 (file)
index e95db80..0000000
--- a/commandfactory.hpp
+++ /dev/null
@@ -1,61 +0,0 @@
-#ifndef COMMANDFACTORY_HPP\r
-#define COMMANDFACTORY_HPP\r
-\r
-/*\r
- *  commandfactory.h\r
- *  \r
- *\r
- *  Created by Pat Schloss on 10/25/08.\r
- *  Copyright 2008 Patrick D. Schloss. All rights reserved.\r
- *\r
- */\r
-\r
-#include "mothur.h"\r
-#include "mothurout.h"\r
-#include "currentfile.h"\r
-\r
-class Command;\r
-\r
-class CommandFactory {\r
-public:\r
-       static CommandFactory* getInstance();\r
-       Command* getCommand(string, string, string);\r
-       Command* getCommand(string, string);\r
-       Command* getCommand(string);\r
-       //Command* getCommand();\r
-       bool isValidCommand(string);\r
-       bool isValidCommand(string, string);\r
-       void printCommands(ostream&);\r
-       void setOutputDirectory(string o)               {       outputDir = o;  m->setOutputDir(o);     }\r
-       void setInputDirectory(string i)                {       inputDir = i;           }\r
-       void setLogfileName(string n, bool a)   {       logFileName = n;  append = a;           }\r
-       string getLogfileName()                                 {       return logFileName;     }\r
-       bool getAppend()                                                {       return append;                  }\r
-       string getOutputDir()                                   {       return outputDir;               }\r
-       bool MPIEnabled(string);\r
-       map<string, string> getListCommands()   {       return commands;                }\r
-       \r
-private:\r
-       Command* command;\r
-       Command* shellcommand;\r
-       Command* pipecommand;\r
-       \r
-       MothurOut* m;\r
-       CurrentFile* currentFile;\r
-       \r
-       map<string, string> commands;\r
-       map<string, string>::iterator it;\r
-       string outputDir, inputDir, logFileName;\r
-       bool append;\r
-       \r
-    int checkForRedirects(string);\r
-    \r
-       static CommandFactory* _uniqueInstance;\r
-       CommandFactory( const CommandFactory& ); // Disable copy constructor\r
-       void operator=( const CommandFactory& ); // Disable assignment operator\r
-       CommandFactory();\r
-       ~CommandFactory();\r
-\r
-};\r
-\r
-#endif\r