added make.group command

[mothur.git] / commandfactory.cpp

diff --git a/commandfactory.cpp b/commandfactory.cpp
index 30b76f813f6710ff9c2cda0819305ca8837f7bf5..e2d114a3ba25e41474af369a8d41752be7616ccd 100644 (file)
--- a/commandfactory.cpp
+++ b/commandfactory.cpp
@@ -73,6 +73,7 @@
 #include "chimerabellerophoncommand.h"
 #include "setlogfilecommand.h"
 #include "phylodiversitycommand.h"
+#include "makegroupcommand.h"
 
 /*******************************************************/
 
@@ -153,6 +154,7 @@ CommandFactory::CommandFactory(){
        commands["parse.sff"]                   = "parse.sff";
        commands["set.logfile"]                 = "set.logfile";
        commands["phylo.diversity"]             = "phylo.diversity";
+       commands["make.group"]                  = "make.group";
        commands["classify.seqs"]               = "MPIEnabled"; 
        commands["dist.seqs"]                   = "MPIEnabled";
        commands["filter.seqs"]                 = "MPIEnabled";
@@ -270,6 +272,7 @@ Command* CommandFactory::getCommand(string commandName, string optionString){
                else if(commandName == "parse.list")                    {       command = new ParseListCommand(optionString);                           }
                else if(commandName == "parse.sff")                             {       command = new ParseSFFCommand(optionString);                            }
                else if(commandName == "phylo.diversity")               {       command = new PhyloDiversityCommand(optionString);                      }
+               else if(commandName == "make.group")                    {       command = new MakeGroupCommand(optionString);                           }
                else                                                                                    {       command = new NoCommand(optionString);                                          }
 
                return command;