#include "phylodiversitycommand.h"
#include "makegroupcommand.h"
#include "chopseqscommand.h"
+#include "clearcutcommand.h"
/*******************************************************/
commands["phylo.diversity"] = "phylo.diversity";
commands["make.group"] = "make.group";
commands["chop.seqs"] = "chop.seqs";
+ commands["clearcut"] = "clearcut";
commands["classify.seqs"] = "MPIEnabled";
commands["dist.seqs"] = "MPIEnabled";
commands["filter.seqs"] = "MPIEnabled";
else if(commandName == "phylo.diversity") { command = new PhyloDiversityCommand(optionString); }
else if(commandName == "make.group") { command = new MakeGroupCommand(optionString); }
else if(commandName == "chop.seqs") { command = new ChopSeqsCommand(optionString); }
+ else if(commandName == "clearcut") { command = new ClearcutCommand(optionString); }
else { command = new NoCommand(optionString); }
return command;