#include "removerarecommand.h"
#include "mergegroupscommand.h"
#include "amovacommand.h"
+#include "homovacommand.h"
/*******************************************************/
commands["nmds"] = "nmds";
commands["remove.rare"] = "remove.rare";
commands["amova"] = "amova";
+ commands["homova"] = "homova";
commands["merge.groups"] = "merge.groups";
commands["pairwise.seqs"] = "MPIEnabled";
commands["pipeline.pds"] = "MPIEnabled";
else if(commandName == "remove.rare") { command = new RemoveRareCommand(optionString); }
else if(commandName == "merge.groups") { command = new MergeGroupsCommand(optionString); }
else if(commandName == "amova") { command = new AmovaCommand(optionString); }
+ else if(commandName == "homova") { command = new HomovaCommand(optionString); }
else { command = new NoCommand(optionString); }
return command;
else if(commandName == "remove.rare") { pipecommand = new RemoveRareCommand(optionString); }
else if(commandName == "merge.groups") { pipecommand = new MergeGroupsCommand(optionString); }
else if(commandName == "amova") { pipecommand = new AmovaCommand(optionString); }
+ else if(commandName == "homova") { pipecommand = new HomovaCommand(optionString); }
else { pipecommand = new NoCommand(optionString); }
return pipecommand;
else if(commandName == "remove.rare") { shellcommand = new RemoveRareCommand(); }
else if(commandName == "merge.groups") { shellcommand = new MergeGroupsCommand(); }
else if(commandName == "amova") { shellcommand = new AmovaCommand(); }
+ else if(commandName == "homova") { shellcommand = new HomovaCommand(); }
else { shellcommand = new NoCommand(); }
return shellcommand;