adding current file class

[mothur.git] / command.hpp

diff --git a/command.hpp b/command.hpp
index 2d1981aa4cca8d7e608e3708750fc079600d1265..f65f6cc0fb14ab1d892dbcc5df567c086ca183c9 100644 (file)
--- a/command.hpp
+++ b/command.hpp
@@ -17,12 +17,11 @@
 #include "optionparser.h"
 #include "validparameter.h"
 #include "mothurout.h"
-#include "currentfile.h"
 
 class Command {
        
        public:
-               Command() {  m = MothurOut::getInstance(); currentFiles = CurrentFile::getInstance();  }
+               Command() {  m = MothurOut::getInstance();   }
                virtual vector<string> getValidParameters() = 0;
                virtual vector<string> getRequiredParameters() = 0; //adding "or" as the last element indicates one of the previous is needed
                virtual vector<string> getRequiredFiles() = 0; //adding "or" as the last element indicates one of the previous is needed
@@ -32,7 +31,7 @@ class Command {
                virtual ~Command() { }
        protected:
                MothurOut* m;
-               CurrentFile* currentFiles;
+               
                bool calledHelp;
        
                map<string, vector<string> >::iterator itTypes;