*** empty log message ***

[mothur.git] / collectcommand.cpp

diff --git a/collectcommand.cpp b/collectcommand.cpp
index 2687f9249fe3aa54b3641b0e4430e9e25da65813..098ec1f29539b28bb25fa928aedebf186351a96a 100644 (file)
--- a/collectcommand.cpp
+++ b/collectcommand.cpp
@@ -22,8 +22,12 @@
 #include "logsd.h"
 #include "bergerparker.h"
 #include "bstick.h"
+#include "goodscoverage.h"
+
+
 #include "coverage.h"
 
+
 //**********************************************************************************************************************
 CollectCommand::CollectCommand(){
        try {
@@ -64,7 +68,9 @@ CollectCommand::CollectCommand(){
                                }else if (globaldata->Estimators[i] == "bergerparker") { 
                                        cDisplays.push_back(new CollectDisplay(new BergerParker(), new OneColumnFile(fileNameRoot+"bergerparker")));
                                }else if (globaldata->Estimators[i] == "bstick") { 
-                                       cDisplays.push_back(new CollectDisplay(new BStick(), new OneColumnFile(fileNameRoot+"bstick")));
+                                       cDisplays.push_back(new CollectDisplay(new BStick(), new ThreeColumnFile(fileNameRoot+"bstick")));
+                               }else if (globaldata->Estimators[i] == "goodscoverage") { 
+                                       cDisplays.push_back(new CollectDisplay(new GoodsCoverage(), new OneColumnFile(fileNameRoot+"goodscoverage")));
                                }
                        }
                }