moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / collect.h

diff --git a/collect.h b/collect.h
deleted file mode 100644 (file)
index 5171233..0000000
--- a/collect.h
+++ /dev/null
@@ -1,41 +0,0 @@
-#ifndef COLLECT_H
-#define COLLECT_H
-
-#include "collectorscurvedata.h"
-#include "display.h"
-#include "ordervector.hpp"
-#include "sabundvector.hpp"
-#include "rabundvector.hpp"
-#include "sharedordervector.h"
-#include "datavector.hpp"
-#include "mothurout.h"
-
-/***********************************************************************/
-
-class Collect {
-       
-public:
-       Collect(OrderVector* order, vector<Display*> disp) :
-                                       numSeqs(order->getNumSeqs()), order(order), displays(disp), label(order->getLabel())  { m = MothurOut::getInstance(); };
-       Collect(SharedOrderVector* sharedorder, vector<Display*> disp) :
-                                       numSeqs(sharedorder->getNumSeqs()), sharedorder(sharedorder), displays(disp), label(sharedorder->getLabel())  { m = MothurOut::getInstance(); }
-
-       ~Collect(){             };
-       int getCurve(float);
-       int getSharedCurve(float);
-       
-private:
-       SharedOrderVector* sharedorder;
-       OrderVector* order;
-       vector<Display*> displays;
-       int numSeqs, numGroupComb, totalNumSeq;
-       string label, groupLabel;
-       void getGroupComb();
-       vector<string> groupComb;
-       bool validGroup(vector<string>, string);
-       MothurOut* m;
-};
-
-
-#endif
-