fixes while testing 1.33.0

[mothur.git] / clustercommand.cpp

diff --git a/clustercommand.cpp b/clustercommand.cpp
index 94129654e1d2b11275e82d3a5da0382b1448efa9..5ac4166c7afa54d2047814bc4b4a18c018786057 100644 (file)
--- a/clustercommand.cpp
+++ b/clustercommand.cpp
@@ -315,7 +315,7 @@ int ClusterCommand::execute(){
             read->read(nameMap);
                }else if (countfile != "") {
             ct = new CountTable();
-            ct->readTable(countfile, false);
+            ct->readTable(countfile, false, false);
             read->read(ct);
         }else { read->read(nameMap); }
                
@@ -361,7 +361,7 @@ int ClusterCommand::execute(){
         }
                m->openOutputFile(listFileName, listFile);
         outputNames.push_back(listFileName); outputTypes["list"].push_back(listFileName);
-               
+        list->printHeaders(listFile);
                
                time_t estart = time(NULL);
                float previousDist = 0.00000;