added cluster.fragments command as well as the nseqs parameter to the venn command

[mothur.git] / clustercommand.cpp

diff --git a/clustercommand.cpp b/clustercommand.cpp
index 6df5faad98cd9a0cd1a78644794cecc3eef0df7d..2f9c36e0ff84c4b67af8f9e4d50e77edd62d414a 100644 (file)
--- a/clustercommand.cpp
+++ b/clustercommand.cpp
@@ -158,7 +158,7 @@ int ClusterCommand::execute(){
                double saveCutoff = cutoff;
                
                while (matrix->getSmallDist() < cutoff && matrix->getNNodes() > 0){
-               
+       cout << matrix->getSmallDist() << '\t' << cutoff << '\t' << matrix->getNNodes() << endl;        
                        if (m->control_pressed) { //clean up
                                delete globaldata->gSparseMatrix;  globaldata->gSparseMatrix = NULL;
                                delete globaldata->gListVector;  globaldata->gListVector = NULL;