changes while testing

[mothur.git] / cluster.cpp

diff --git a/cluster.cpp b/cluster.cpp
index 18133a29030cc47d10ab7a1c7f3572cec74e4c29..0a70fbfee99957de6f08315562f9f0d9ac14fee0 100644 (file)
--- a/cluster.cpp
+++ b/cluster.cpp
@@ -64,7 +64,7 @@ void Cluster::update(double& cutOFF){
         nRowCells = dMatrix->seqVec[smallRow].size();
         
                vector<int> foundCol(nColCells, 0);
-        //cout << dMatrix->getNNodes() << " small cell: " << smallRow << '\t' << smallCol << endl;  
+        //cout << dMatrix->getNNodes() << " small cell: " << smallRow << '\t' << smallCol << endl;
                int search;
                bool changed;
         
@@ -91,7 +91,8 @@ void Cluster::update(double& cutOFF){
                                //if not merged it you need it for warning 
                                if ((!merged) && (method == "average" || method == "weighted")) {  
                                        if (cutOFF > dMatrix->seqVec[smallRow][i].dist) {  
-                                               cutOFF = dMatrix->seqVec[smallRow][i].dist;  
+                                               cutOFF = dMatrix->seqVec[smallRow][i].dist;
+                        //cout << "changing cutoff to " << cutOFF << endl;
                                        }
                     
                                }