sffinfo bug with flow grams right index when clipQualRight=0

[mothur.git] / clearmemorycommand.cpp

diff --git a/clearmemorycommand.cpp b/clearmemorycommand.cpp
index e1f39723c6b6b9d56c961fa16345c6194f9c8a7c..abdc5558ae1aa26ab7c2d21454f8ff0696802ad1 100644 (file)
--- a/clearmemorycommand.cpp
+++ b/clearmemorycommand.cpp
@@ -22,25 +22,6 @@ vector<string> ClearMemoryCommand::setParameters(){
        }
 }
 //**********************************************************************************************************************
-string ClearMemoryCommand::getOutputFileNameTag(string type, string inputName=""){     
-       try {
-        string outputFileName = "";
-               map<string, vector<string> >::iterator it;
-        
-        //is this a type this command creates
-        it = outputTypes.find(type);
-        if (it == outputTypes.end()) {  m->mothurOut("[ERROR]: this command doesn't create a " + type + " output file.\n"); }
-        else {
-            m->mothurOut("[ERROR]: No definition for type " + type + " output file tag.\n"); m->control_pressed = true; 
-        }
-        return outputFileName;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "ClearMemoryCommand", "getOutputFileNameTag");
-               exit(1);
-       }
-}
-//**********************************************************************************************************************
 string ClearMemoryCommand::getHelpString(){    
        try {
                string helpString = "";