CommandParameter pnumtrees("numtrees", "Number", "", "100", "", "", "","",false,false); parameters.push_back(pnumtrees);
// parameters related to pruning
- CommandParameter pdopruning("prune", "Boolean", "", "F", "", "", "", "", false, false); parameters.push_back(pdopruning);
+ CommandParameter pdopruning("prune", "Boolean", "", "T", "", "", "", "", false, false); parameters.push_back(pdopruning);
CommandParameter ppruneaggrns("pruneaggressiveness", "Number", "", "0.9", "", "", "", "", false, false); parameters.push_back(ppruneaggrns);
- CommandParameter pdiscardhetrees("discarderrortrees", "Boolean", "", "F", "", "", "", "", false, false); parameters.push_back(pdiscardhetrees);
+ CommandParameter pdiscardhetrees("discarderrortrees", "Boolean", "", "T", "", "", "", "", false, false); parameters.push_back(pdiscardhetrees);
CommandParameter phetdiscardthreshold("errorthreshold", "Number", "", "0.4", "", "", "", "", false, false); parameters.push_back(phetdiscardthreshold);
CommandParameter psdthreshold("stdthreshold", "Number", "", "0.0", "", "", "", "", false, false); parameters.push_back(psdthreshold);
// pruning params end
randomForest.calcForrestErrorRate();
map<string, string> variables;
- variables["[filename]"] = outputDir + m->getRootName(m->getSimpleName(sharedfile));
+ variables["[filename]"] = outputDir + m->getRootName(m->getSimpleName(sharedfile)) + ".RF.";
variables["[distance]"] = lookup[0]->getLabel();
string filename = getOutputFileName("summary", variables);
outputNames.push_back(filename); outputTypes["summary"].push_back(filename);