added phylotype command which reads a taxonomy file and creates a .list, .rabund...

[mothur.git] / classifyseqscommand.cpp

diff --git a/classifyseqscommand.cpp b/classifyseqscommand.cpp
index 40bf93817976d1a81a12c9e5604ca470b8bf33cb..d2f8fc748f3064bd03a525ce6d9e6bb7895d55fe 100644 (file)
--- a/classifyseqscommand.cpp
+++ b/classifyseqscommand.cpp
@@ -10,14 +10,13 @@
 #include "classifyseqscommand.h"
 #include "sequence.hpp"
 #include "bayesian.h"
-#include "doTaxonomy.h"
+#include "phylotree.h"
 #include "knn.h"
 
 //**********************************************************************************************************************
 
 ClassifySeqsCommand::ClassifySeqsCommand(string option){
        try {
-               //              globaldata = GlobalData::getInstance();
                abort = false;
                
                //allow user to run help