added multiple processors option for Windows users to align.seqs, dist.seqs, summary...

[mothur.git] / classifyseqscommand.cpp

diff --git a/classifyseqscommand.cpp b/classifyseqscommand.cpp
index d9bd698232196c4c3597f8425a8e3f6e8b6b0694..4291132c74ea9537e9abfdea7779ac404d636c2a 100644 (file)
--- a/classifyseqscommand.cpp
+++ b/classifyseqscommand.cpp
@@ -475,12 +475,12 @@ int ClassifySeqsCommand::execute(){
        try {
                if (abort == true) { if (calledHelp) { return 0; }  return 2;   }
                
-               if(method == "bayesian"){       classify = new Bayesian(taxonomyFileName, templateFileName, search, kmerSize, cutoff, iters);           }
-               else if(method == "knn"){       classify = new Knn(taxonomyFileName, templateFileName, search, kmerSize, gapOpen, gapExtend, match, misMatch, numWanted);                               }
+               if(method == "bayesian"){       classify = new Bayesian(taxonomyFileName, templateFileName, search, kmerSize, cutoff, iters, rand());           }
+               else if(method == "knn"){       classify = new Knn(taxonomyFileName, templateFileName, search, kmerSize, gapOpen, gapExtend, match, misMatch, numWanted, rand());                               }
                else {
                        m->mothurOut(search + " is not a valid method option. I will run the command using bayesian.");
                        m->mothurOutEndLine();
-                       classify = new Bayesian(taxonomyFileName, templateFileName, search, kmerSize, cutoff, iters);   
+                       classify = new Bayesian(taxonomyFileName, templateFileName, search, kmerSize, cutoff, iters, rand());   
                }
                
                if (m->control_pressed) { delete classify; return 0; }