fixes while testing

[mothur.git] / classifyotucommand.cpp

diff --git a/classifyotucommand.cpp b/classifyotucommand.cpp
index cedc1f2c71c450f80ad5bcfefffe8713effab6fb..3469c82c0c1507604e87ea05efc30ca74927e09f 100644 (file)
--- a/classifyotucommand.cpp
+++ b/classifyotucommand.cpp
@@ -25,6 +25,7 @@ vector<string> ClassifyOtuCommand::getValidParameters(){
 //**********************************************************************************************************************
 ClassifyOtuCommand::ClassifyOtuCommand(){      
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["constaxonomy"] = tempOutNames;