added get.otulabels and remove.otulabels commands per user request

[mothur.git] / classifyotucommand.cpp

diff --git a/classifyotucommand.cpp b/classifyotucommand.cpp
index ec22de8b35762adf92e2a3b750198dcbb91f0396..ef41ee1bab8853f6741938005f775076b60723ab 100644 (file)
--- a/classifyotucommand.cpp
+++ b/classifyotucommand.cpp
@@ -544,7 +544,9 @@ int ClassifyOtuCommand::process(ListVector* processList) {
                        taxaSum = new PhyloSummary(groupfile);
                }
                
+
                //for each bin in the list vector
+        string snumBins = toString(processList->getNumBins());
                for (int i = 0; i < processList->getNumBins(); i++) {
                        
                        if (m->control_pressed) { break; }
@@ -555,7 +557,15 @@ int ClassifyOtuCommand::process(ListVector* processList) {
                        if (m->control_pressed) { out.close();  return 0; }
                        
                        //output to new names file
-                       out << (i+1) << '\t' << size << '\t' << conTax << endl;
+            string binLabel = "Otu";
+            string sbinNumber = toString(i+1);
+            if (sbinNumber.length() < snumBins.length()) { 
+                int diff = snumBins.length() - sbinNumber.length();
+                for (int h = 0; h < diff; h++) { binLabel += "0"; }
+            }
+            binLabel += sbinNumber;
+
+                       out << binLabel << '\t' << size << '\t' << conTax << endl;
                        
                        string noConfidenceConTax = conTax;
                        m->removeConfidences(noConfidenceConTax);