finished shhh.seqs command, fixed bug with remove.groups and get.groups that caused...

[mothur.git] / chimerauchimecommand.h

diff --git a/chimerauchimecommand.h b/chimerauchimecommand.h
index 6e1f809ce55a332020240bdc0b5e30398b5d5b49..f6e0ab55d5cff328c4a6a247ddb2b72e1ee26df6 100644 (file)
--- a/chimerauchimecommand.h
+++ b/chimerauchimecommand.h
@@ -181,7 +181,7 @@ static DWORD WINAPI MyUchimeThreadFunction(LPVOID lpParam){
                        
                        string path = pDataArray->m->argv;
                        string tempPath = path;
-                       for (int i = 0; i < path.length(); i++) { tempPath[i] = tolower(path[i]); }
+                       for (int j = 0; j < path.length(); j++) { tempPath[j] = tolower(path[j]); }
                        path = path.substr(0, (tempPath.find_last_of('m')));
                        
                        string uchimeCommand = path;