added count.seqs command and made some modifcations to the uchime code to allow it...

[mothur.git] / chimerauchimecommand.cpp

diff --git a/chimerauchimecommand.cpp b/chimerauchimecommand.cpp
index d4cb57a3158a85008d30d9c875e331f5be5801e9..33b48bd184ba95f1db5e1db2117a32a64254c664 100644 (file)
--- a/chimerauchimecommand.cpp
+++ b/chimerauchimecommand.cpp
@@ -744,7 +744,7 @@ int ChimeraUchimeCommand::createProcesses(string outputFileName, string filename
                processIDS.clear();
                int process = 1;
                int num = 0;
-               
+#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)          
                //break up file into multiple files
                vector<string> files;
                m->divideFile(filename, processors, files);
@@ -852,7 +852,7 @@ int ChimeraUchimeCommand::createProcesses(string outputFileName, string filename
 #endif         
                //get rid of the file pieces.
                for (int i = 0; i < files.size(); i++) { remove(files[i].c_str()); }
-               
+#endif         
                return num;     
        }
        catch(exception& e) {