added mantel command

[mothur.git] / chimeraslayercommand.h

diff --git a/chimeraslayercommand.h b/chimeraslayercommand.h
index 0de118f62016d1497f07461033f7696319b5a7a9..ff1933735b2862935b3283b61ca96f180f6df546 100644 (file)
--- a/chimeraslayercommand.h
+++ b/chimeraslayercommand.h
@@ -48,7 +48,7 @@ private:
        int driverMPI(int, int, MPI_File&, MPI_File&, MPI_File&, MPI_File&, vector<unsigned long int>&);
        #endif
 
-       bool abort, realign, trim;
+       bool abort, realign, trim, trimera;
        string fastafile, templatefile, outputDir, search, namefile, includeAbunds;
        int processors, window, iters, increment, numwanted, ksize, match, mismatch, parents, minSimilarity, minCoverage, minBS, minSNP, numSeqs, templateSeqsLength;
        float divR;