working on chimeraslayer and found bug in shared command.

[mothur.git] / chimeraslayer.h

diff --git a/chimeraslayer.h b/chimeraslayer.h
index 617ba7ee9557eb6ad54f65b4aa99f323fd5afd86..a305b5bfd09601220b15a44fd0ad18ee6b42a09d 100644 (file)
--- a/chimeraslayer.h
+++ b/chimeraslayer.h
@@ -40,6 +40,9 @@ class ChimeraSlayer : public Chimera {
                vector<linePair*> lines;
                vector<Sequence*> querySeqs;
                vector<Sequence*> templateSeqs;
+               
+               vector< vector<data_struct> > chimeraResults;
+               vector<string> chimeraFlags;
                                
                string fastafile, templateFile;