added versioning info to all shortcut files mothur makes.

[mothur.git] / chimeraslayer.cpp

diff --git a/chimeraslayer.cpp b/chimeraslayer.cpp
index b92e8c8d355f6d105c141857bd96c19538ba194b..ff13590cd3a91cb8960e26af803ca7fa63918035 100644 (file)
--- a/chimeraslayer.cpp
+++ b/chimeraslayer.cpp
@@ -102,8 +102,14 @@ int ChimeraSlayer::doPrep() {
                        //leftside
                        kmerDBNameLeft = leftTemplateFileName.substr(0,leftTemplateFileName.find_last_of(".")+1) + char('0'+ kmerSize) + "mer";
                        ifstream kmerFileTestLeft(kmerDBNameLeft.c_str());
+                       bool needToGenerateLeft = true;
                        
-                       if(!kmerFileTestLeft){  
+                       if(kmerFileTestLeft){   
+                               bool GoodFile = checkReleaseVersion(kmerFileTestLeft, m->getVersion());
+                               if (GoodFile) {  needToGenerateLeft = false;    }
+                       }
+                       
+                       if(needToGenerateLeft){ 
                        
                                for (int i = 0; i < templateSeqs.size(); i++) {
                                        
@@ -127,8 +133,14 @@ int ChimeraSlayer::doPrep() {
                        //rightside
                        kmerDBNameRight = rightTemplateFileName.substr(0,rightTemplateFileName.find_last_of(".")+1) + char('0'+ kmerSize) + "mer";
                        ifstream kmerFileTestRight(kmerDBNameRight.c_str());
+                       bool needToGenerateRight = true;
+                       
+                       if(kmerFileTestRight){  
+                               bool GoodFile = checkReleaseVersion(kmerFileTestRight, m->getVersion());
+                               if (GoodFile) {  needToGenerateRight = false;   }
+                       }
                        
-                       if(!kmerFileTestRight){ 
+                       if(needToGenerateRight){        
                        
                                for (int i = 0; i < templateSeqs.size(); i++) {
                                        if (m->control_pressed) { return 0; }