checking in chimera files in progress after move to michigan

[mothur.git] / chimeraseqscommand.h

diff --git a/chimeraseqscommand.h b/chimeraseqscommand.h
index 7721ef8e9428a9e12b1ad0e930f419389d813fca..6274c48ea2acd8849155e9fc3b8813f6bae74919 100644 (file)
--- a/chimeraseqscommand.h
+++ b/chimeraseqscommand.h
@@ -28,9 +28,9 @@ public:
 private:
        
        bool abort;
-       string method, fastafile, templatefile, consfile, quanfile;
+       string method, fastafile, templatefile, consfile, quanfile, maskfile;
        bool filter, correction;
-       int processors, midpoint, averageLeft, averageRight, window, iters, increment;
+       int processors, midpoint, averageLeft, averageRight, window, iters, increment, numwanted;
        Chimera* chimera;